Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Grik1-210ENSMUST00000228034 2708 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Mir503-201ENSMUST00000102168 71 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm14824-201ENSMUST00000119421 737 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm29355-201ENSMUST00000188178 697 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm28953-201ENSMUST00000188336 697 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm20788-201ENSMUST00000190538 697 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm37395-201ENSMUST00000194721 697 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm43243-201ENSMUST00000199964 278 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Klf10-202ENSMUST00000226363 2917 ntBASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps53Q8CCB4 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm5228-201ENSMUST00000117186 357 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm22206-201ENSMUST00000158612 116 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm27596-201ENSMUST00000185061 83 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm28064-201ENSMUST00000185639 858 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm28983-201ENSMUST00000186685 614 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm28150-201ENSMUST00000187305 614 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm28377-201ENSMUST00000189695 720 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm7369-201ENSMUST00000192738 936 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm2767-201ENSMUST00000209582 473 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Gm46317-201ENSMUST00000221103 393 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps53Q8CCB4 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms