Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sf3b2Q3UJB0 Gm4849-201ENSMUST00000188428 2246 ntBASIC9.74□□□□□ -0.85
Sf3b2Q3UJB0 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sf3b2Q3UJB0 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sf3b2Q3UJB0 Npr3-204ENSMUST00000228489 1969 ntBASIC9.74□□□□□ -0.85
Sf3b2Q3UJB0 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm6640-201ENSMUST00000120629 1587 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm16056-201ENSMUST00000119293 135 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm11850-201ENSMUST00000119679 479 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm13495-201ENSMUST00000121156 537 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm11472-201ENSMUST00000121305 556 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm15164-201ENSMUST00000122203 271 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm14747-201ENSMUST00000149888 984 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm25117-201ENSMUST00000157194 144 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm17022-201ENSMUST00000166415 922 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm3208-201ENSMUST00000168281 427 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm8101-201ENSMUST00000192796 478 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm7166-201ENSMUST00000199715 303 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm7413-201ENSMUST00000219498 462 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 AC122251.1-201ENSMUST00000227717 639 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Mir3068-201ENSMUST00000083004 136 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm23734-201ENSMUST00000083753 109 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm22351-201ENSMUST00000083925 107 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm6990-201ENSMUST00000086830 348 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 AC123705.1-201ENSMUST00000222512 2058 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm44835-201ENSMUST00000205544 3181 ntBASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC9.73□□□□□ -0.85
Sf3b2Q3UJB0 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm19028-201ENSMUST00000189614 1873 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm7435-202ENSMUST00000216003 2424 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm26417-201ENSMUST00000104274 135 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm11920-201ENSMUST00000118491 563 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm12833-201ENSMUST00000136112 477 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Ighv1-10-201ENSMUST00000194372 355 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm2860-201ENSMUST00000199226 707 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 AC073562.1-201ENSMUST00000222117 401 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 AC154642.1-201ENSMUST00000224173 740 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 AC164437.4-202ENSMUST00000228794 2413 ntBASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3b2Q3UJB0 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3b2Q3UJB0 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3b2Q3UJB0 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3b2Q3UJB0 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.71□□□□□ -0.85
Sf3b2Q3UJB0 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3b2Q3UJB0 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3b2Q3UJB0 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms