Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Sdc1P18828 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sdc1P18828 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sdc1P18828 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sdc1P18828 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sdc1P18828 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Sdc1P18828 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Sdc1P18828 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.9□□□□□ -1.47
Sdc1P18828 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Sdc1P18828 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sdc1P18828 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.9□□□□□ -1.47
Sdc1P18828 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sdc1P18828 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sdc1P18828 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Sdc1P18828 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm13576-201ENSMUST00000120851 778 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm2214-201ENSMUST00000121333 330 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC5.89□□□□□ -1.47
Sdc1P18828 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm6428-201ENSMUST00000161062 345 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Sdc1P18828 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm20281-201ENSMUST00000188225 267 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm29739-201ENSMUST00000191760 529 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Ighv1-8-201ENSMUST00000192236 293 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm35108-201ENSMUST00000194321 699 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm33191-201ENSMUST00000195604 699 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm10416-201ENSMUST00000197379 645 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm21054-201ENSMUST00000203981 380 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Dppa5b-201ENSMUST00000214261 348 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Dppa5c-201ENSMUST00000216268 348 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC5.89□□□□□ -1.47
Sdc1P18828 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 AC163296.1-201ENSMUST00000220004 1266 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC5.89□□□□□ -1.47
Sdc1P18828 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC5.89□□□□□ -1.47
Sdc1P18828 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sdc1P18828 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm32072-201ENSMUST00000200803 1434 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sdc1P18828 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sdc1P18828 Gm42678-201ENSMUST00000197163 2221 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.89□□□□□ -1.47
Sdc1P18828 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm43670-201ENSMUST00000199047 1767 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm13183-201ENSMUST00000118615 789 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm11945-201ENSMUST00000120551 476 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm12477-201ENSMUST00000121221 571 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm14749-201ENSMUST00000121269 333 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm22024-201ENSMUST00000122733 287 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm22616-201ENSMUST00000179783 100 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm17867-201ENSMUST00000188981 391 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm44823-201ENSMUST00000204775 1107 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC5.88□□□□□ -1.47
Sdc1P18828 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms