Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm37121-201ENSMUST00000192219 2556 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm43800-201ENSMUST00000201868 2731 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col1a1P11087 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col1a1P11087 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Col1a1P11087 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm11341-201ENSMUST00000122316 447 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm25969-201ENSMUST00000157166 132 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm6428-201ENSMUST00000161062 345 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm37439-201ENSMUST00000193150 856 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm7804-202ENSMUST00000194187 854 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Col1a1P11087 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 AC165349.1-201ENSMUST00000217896 424 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 AC135086.1-201ENSMUST00000228621 817 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.62□□□□□ -1.03
Col1a1P11087 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col1a1P11087 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.61□□□□□ -1.03
Col1a1P11087 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.61□□□□□ -1.03
Col1a1P11087 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Mir1929-201ENSMUST00000158635 93 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm27602-201ENSMUST00000183861 111 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm29509-201ENSMUST00000185716 321 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC8.61□□□□□ -1.03
Col1a1P11087 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC8.61□□□□□ -1.03
Col1a1P11087 Gm7867-201ENSMUST00000189856 546 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm19087-201ENSMUST00000191430 946 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Gm6074-201ENSMUST00000193340 451 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Ighv1-14-201ENSMUST00000194015 402 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Ighv8-3-201ENSMUST00000194985 295 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm44162-201ENSMUST00000203543 544 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm45279-201ENSMUST00000210315 391 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC8.61□□□□□ -1.03
Col1a1P11087 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col1a1P11087 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Gm8728-201ENSMUST00000207367 2178 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm8486-201ENSMUST00000207508 2171 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm8685-201ENSMUST00000207567 2183 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm16443-201ENSMUST00000207909 2184 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Smcr8-202ENSMUST00000102667 3544 ntBASIC8.61□□□□□ -1.03
Col1a1P11087 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Col1a1P11087 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col1a1P11087 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col1a1P11087 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms