Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx1-1G3UXB3 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Acox2-201ENSMUST00000022271 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm36963-201ENSMUST00000193506 2324 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 9130015G15Rik-201ENSMUST00000208621 1973 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Slc30a2-202ENSMUST00000105872 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm26965-201ENSMUST00000167914 1520 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 AC115760.1-201ENSMUST00000225160 1327 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm23358-201ENSMUST00000103887 110 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm9836-201ENSMUST00000117132 216 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm11348-201ENSMUST00000118813 318 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm11461-201ENSMUST00000119909 387 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm12019-201ENSMUST00000121258 532 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm15729-201ENSMUST00000125829 360 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Defa-ps3-201ENSMUST00000142705 282 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm11507-201ENSMUST00000156462 412 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm25265-201ENSMUST00000158520 347 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm25442-201ENSMUST00000177270 92 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm18327-201ENSMUST00000202426 830 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm8999-201ENSMUST00000204951 969 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm19005-201ENSMUST00000218890 865 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 AC167013.6-201ENSMUST00000226587 1067 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 AC131997.2-201ENSMUST00000227452 362 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 AC154484.2-201ENSMUST00000228359 818 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm23096-201ENSMUST00000083447 107 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Rhox12-201ENSMUST00000096453 920 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm45084-201ENSMUST00000207096 1957 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 AC158779.2-201ENSMUST00000227902 1947 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Gm16026-206ENSMUST00000163068 2741 ntBASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx1-1G3UXB3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Gm38066-201ENSMUST00000193223 1634 ntBASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 2610028H24Rik-201ENSMUST00000092406 1640 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 CT572991.1-201ENSMUST00000222755 1423 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx1-1G3UXB3 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms