Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm23484-201ENSMUST00000104178 131 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm7091-201ENSMUST00000116438 586 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm12955-201ENSMUST00000119689 957 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm14053-201ENSMUST00000121662 470 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm25277-201ENSMUST00000157266 324 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm23079-201ENSMUST00000157847 117 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm23187-201ENSMUST00000175746 86 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Mir7011-201ENSMUST00000183768 73 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Mir6340-201ENSMUST00000183857 119 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm37469-201ENSMUST00000193728 890 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm38305-201ENSMUST00000194825 223 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm19175-201ENSMUST00000199895 916 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim3Q9R1R2 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm12919-201ENSMUST00000119855 1594 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm15047-201ENSMUST00000118891 454 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm11474-201ENSMUST00000120814 277 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm12634-201ENSMUST00000122157 992 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm24530-201ENSMUST00000157948 288 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm20430-201ENSMUST00000172474 207 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm5835-201ENSMUST00000185806 1270 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm38254-201ENSMUST00000192276 1009 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Trbv9-201ENSMUST00000194494 290 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Gm23011-202ENSMUST00000197855 275 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms