Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.94□□□□□ -0.82
Nphp4P59240 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nphp4P59240 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nphp4P59240 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Gm12710-201ENSMUST00000119011 216 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Gm14251-201ENSMUST00000122133 279 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
Nphp4P59240 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Gm16027-201ENSMUST00000161618 758 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Gm4613-201ENSMUST00000165488 276 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Gm5050-201ENSMUST00000197164 775 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC9.93□□□□□ -0.82
Nphp4P59240 AC126554.3-201ENSMUST00000223131 493 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nphp4P59240 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 AC187103.1-201ENSMUST00000224641 1475 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.93□□□□□ -0.82
Nphp4P59240 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Nphp4P59240 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nphp4P59240 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nphp4P59240 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm7821-201ENSMUST00000117111 788 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm3760-201ENSMUST00000167475 804 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nphp4P59240 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm8924-201ENSMUST00000197405 1132 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Gm44471-201ENSMUST00000197963 100 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Gm4870-201ENSMUST00000198525 1251 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Gm21040-201ENSMUST00000199493 1132 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.92□□□□□ -0.82
Nphp4P59240 AC154380.1-201ENSMUST00000226804 720 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Gm10108-201ENSMUST00000078246 319 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Nphp4P59240 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Gm26645-201ENSMUST00000181076 1316 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Gm28906-201ENSMUST00000191371 1779 ntBASIC9.92□□□□□ -0.82
Nphp4P59240 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Nphp4P59240 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Nphp4P59240 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nphp4P59240 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.91□□□□□ -0.82
Nphp4P59240 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Nphp4P59240 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.91□□□□□ -0.82
Nphp4P59240 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms