Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NcanP55066 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm43589-201ENSMUST00000199400 1523 ntBASIC7.93□□□□□ -1.14
NcanP55066 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NcanP55066 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NcanP55066 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NcanP55066 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NcanP55066 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
NcanP55066 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm14727-201ENSMUST00000118526 525 ntBASIC7.93□□□□□ -1.14
NcanP55066 Gm9439-201ENSMUST00000119554 973 ntBASIC7.93□□□□□ -1.14
NcanP55066 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.93□□□□□ -1.14
NcanP55066 Gm14721-201ENSMUST00000121381 525 ntBASIC7.93□□□□□ -1.14
NcanP55066 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.93□□□□□ -1.14
NcanP55066 Gm25395-201ENSMUST00000157343 272 ntBASIC7.93□□□□□ -1.14
NcanP55066 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
NcanP55066 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.93□□□□□ -1.14
NcanP55066 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.93□□□□□ -1.14
NcanP55066 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
NcanP55066 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC7.93□□□□□ -1.14
NcanP55066 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NcanP55066 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm4083-201ENSMUST00000207158 451 ntBASIC7.93□□□□□ -1.14
NcanP55066 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.93□□□□□ -1.14
NcanP55066 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.93□□□□□ -1.14
NcanP55066 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.93□□□□□ -1.14
NcanP55066 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.93□□□□□ -1.14
NcanP55066 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NcanP55066 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
NcanP55066 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.92□□□□□ -1.14
NcanP55066 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
NcanP55066 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.92□□□□□ -1.14
NcanP55066 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Gm43323-201ENSMUST00000202328 4258 ntBASIC7.92□□□□□ -1.14
NcanP55066 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NcanP55066 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NcanP55066 Gm15578-201ENSMUST00000117320 475 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm9506-201ENSMUST00000118516 320 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm11320-201ENSMUST00000119434 463 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.92□□□□□ -1.14
NcanP55066 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Gm24545-201ENSMUST00000158651 85 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm8540-201ENSMUST00000168952 732 ntBASIC7.92□□□□□ -1.14
NcanP55066 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NcanP55066 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC7.92□□□□□ -1.14
NcanP55066 Gm29048-201ENSMUST00000185342 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29403-201ENSMUST00000185491 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28234-201ENSMUST00000185657 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28248-201ENSMUST00000186093 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm29633-202ENSMUST00000186217 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28829-201ENSMUST00000186231 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28261-201ENSMUST00000186417 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28983-201ENSMUST00000186685 614 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28815-201ENSMUST00000186751 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28608-201ENSMUST00000186860 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.92□□□□□ -1.14
NcanP55066 Gm28122-201ENSMUST00000187088 615 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28150-201ENSMUST00000187305 614 ntBASIC7.92□□□□□ -1.14
NcanP55066 Gm28420-201ENSMUST00000187340 615 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms