Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.41□□□□□ -0.9
Msh6P54276 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Gm6640-201ENSMUST00000120629 1587 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Msh6P54276 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Msh6P54276 Gm12804-201ENSMUST00000121030 999 ntBASIC9.4□□□□□ -0.9
Msh6P54276 Gm14787-201ENSMUST00000121236 388 ntBASIC9.4□□□□□ -0.9
Msh6P54276 Gm14990-201ENSMUST00000122354 445 ntBASIC9.4□□□□□ -0.9
Msh6P54276 Gm16138-201ENSMUST00000159341 821 ntBASIC9.4□□□□□ -0.9
Msh6P54276 Gm28117-201ENSMUST00000188472 371 ntBASIC9.4□□□□□ -0.9
Msh6P54276 AC099760.1-201ENSMUST00000196300 153 ntBASIC9.4□□□□□ -0.9
Msh6P54276 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Gm44227-201ENSMUST00000203576 241 ntBASIC9.4□□□□□ -0.9
Msh6P54276 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Msh6P54276 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC9.4□□□□□ -0.9
Msh6P54276 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Msh6P54276 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Msh6P54276 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Msh6P54276 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Gm45737-201ENSMUST00000208344 1612 ntBASIC9.4□□□□□ -0.9
Msh6P54276 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.4□□□□□ -0.9
Msh6P54276 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Msh6P54276 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Msh6P54276 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC9.4□□□□□ -0.9
Msh6P54276 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Msh6P54276 AC154522.1-201ENSMUST00000224647 1903 ntBASIC9.4□□□□□ -0.91
Msh6P54276 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Msh6P54276 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Msh6P54276 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.4□□□□□ -0.91
Msh6P54276 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Msh6P54276 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.4□□□□□ -0.91
Msh6P54276 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Msh6P54276 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Msh6P54276 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Msh6P54276 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm25379-201ENSMUST00000104338 114 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Gm14891-201ENSMUST00000117378 596 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Gm12653-201ENSMUST00000117778 561 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm27014-201ENSMUST00000182658 937 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm43546-201ENSMUST00000196721 943 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Msh6P54276 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC9.39□□□□□ -0.91
Msh6P54276 Gm42713-201ENSMUST00000202709 945 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Gm45136-201ENSMUST00000205793 943 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC9.39□□□□□ -0.91
Msh6P54276 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC9.39□□□□□ -0.91
Msh6P54276 CT009556.4-201ENSMUST00000227092 200 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Msh6P54276 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 AC154347.1-201ENSMUST00000221358 3105 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 Gm18830-201ENSMUST00000199036 1396 ntBASIC9.39□□□□□ -0.91
Msh6P54276 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Msh6P54276 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.39□□□□□ -0.91
Msh6P54276 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 128.8 ms