Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm8858-201ENSMUST00000118259 342 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm13552-201ENSMUST00000118837 417 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm11370-201ENSMUST00000120583 260 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Mir6340-201ENSMUST00000183857 119 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Sox1P53783 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.17□□□□□ -1.1
Sox1P53783 Mir1892-201ENSMUST00000197752 80 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Mir3107-201ENSMUST00000199351 90 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm43558-201ENSMUST00000200155 210 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Gm36070-202ENSMUST00000200467 961 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Gm2040-201ENSMUST00000202979 289 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.17□□□□□ -1.1
Sox1P53783 Gm38574-201ENSMUST00000211855 640 ntBASIC8.17□□□□□ -1.1
Sox1P53783 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Sox1P53783 Gm19987-201ENSMUST00000216339 499 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sox1P53783 AC109214.2-201ENSMUST00000220089 358 ntBASIC8.17□□□□□ -1.1
Sox1P53783 AC131187.2-201ENSMUST00000223936 994 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Sox1P53783 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Sox1P53783 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Sox1P53783 Gm22684-201ENSMUST00000082849 132 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
Sox1P53783 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Gm7648-201ENSMUST00000173036 1658 ntBASIC8.17□□□□□ -1.1
Sox1P53783 Anxa10-201ENSMUST00000034052 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Sox1P53783 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Sox1P53783 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sox1P53783 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
Sox1P53783 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Sox1P53783 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Sox1P53783 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm15030-201ENSMUST00000119804 484 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm7189-201ENSMUST00000119811 429 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm14860-201ENSMUST00000120277 429 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm14369-201ENSMUST00000121355 285 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm11358-201ENSMUST00000122310 373 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm24530-201ENSMUST00000157948 288 ntBASIC8.16□□□□□ -1.1
Sox1P53783 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Sox1P53783 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Sox1P53783 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 4632432E15Rik-201ENSMUST00000191824 2439 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 4933438B17Rik-201ENSMUST00000196336 1169 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm4602-201ENSMUST00000203198 308 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm44037-201ENSMUST00000204816 1891 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm45485-201ENSMUST00000211229 357 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Sox1P53783 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.16□□□□□ -1.1
Sox1P53783 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Gm9848-201ENSMUST00000053398 259 ntBASIC8.16□□□□□ -1.1
Sox1P53783 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Sox1P53783 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sox1P53783 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Sox1P53783 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms