Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm22847-201ENSMUST00000157707 105 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm3715-201ENSMUST00000172308 617 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC9.22□□□□□ -0.93
Rfx1P48377 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm29143-201ENSMUST00000189462 201 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm37632-201ENSMUST00000191811 1142 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm42474-201ENSMUST00000201073 505 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm43295-201ENSMUST00000201439 412 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm8686-201ENSMUST00000203028 388 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm2734-201ENSMUST00000208561 743 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm4800-201ENSMUST00000215776 1266 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 AC132121.1-201ENSMUST00000220774 332 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm7239-201ENSMUST00000220981 860 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Grik1-210ENSMUST00000228034 2708 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 AC154738.6-201ENSMUST00000227225 1352 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm43225-201ENSMUST00000201381 1439 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rfx1P48377 Gm12378-201ENSMUST00000116171 1461 ntBASIC9.21□□□□□ -0.93
Rfx1P48377 Gm5361-201ENSMUST00000211041 1498 ntBASIC9.21□□□□□ -0.93
Rfx1P48377 Gm12661-201ENSMUST00000118780 3335 ntBASIC9.21□□□□□ -0.93
Rfx1P48377 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Rfx1P48377 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rfx1P48377 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rfx1P48377 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.21□□□□□ -0.93
Rfx1P48377 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rfx1P48377 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.93
Rfx1P48377 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rfx1P48377 Gm25761-201ENSMUST00000103983 128 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Gm26012-201ENSMUST00000104411 128 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm12288-201ENSMUST00000121054 1282 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Gm14983-201ENSMUST00000121551 323 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC9.21□□□□□ -0.94
Rfx1P48377 Snhg7-201ENSMUST00000181621 139 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm43287-201ENSMUST00000197747 600 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm43992-201ENSMUST00000204358 197 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Gm43905-201ENSMUST00000204516 204 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC9.21□□□□□ -0.94
Rfx1P48377 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC9.21□□□□□ -0.94
Rfx1P48377 AC165155.1-201ENSMUST00000228932 445 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms