Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm22438-201ENSMUST00000104049 132 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Hoxa4P06798 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm8215-201ENSMUST00000120627 990 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm8577-201ENSMUST00000122420 986 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm9697-201ENSMUST00000147052 997 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm6428-201ENSMUST00000161062 345 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm28006-201ENSMUST00000183841 122 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm27373-201ENSMUST00000184017 184 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm2505-201ENSMUST00000200413 825 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm44487-201ENSMUST00000205145 325 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm45198-201ENSMUST00000206796 591 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm18469-201ENSMUST00000208850 439 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hoxa4P06798 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Hoxa4P06798 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hoxa4P06798 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.35□□□□□ -1.23
Hoxa4P06798 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm11962-201ENSMUST00000145746 255 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm22262-201ENSMUST00000158713 86 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm19815-201ENSMUST00000175818 335 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm21430-201ENSMUST00000182998 998 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm6931-201ENSMUST00000183103 371 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm7285-201ENSMUST00000198801 580 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm18562-201ENSMUST00000209949 915 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Gm8667-201ENSMUST00000211112 449 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Olfr683-201ENSMUST00000061284 960 ntBASIC7.34□□□□□ -1.23
Hoxa4P06798 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hoxa4P06798 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hoxa4P06798 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hoxa4P06798 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Hoxa4P06798 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC7.34□□□□□ -1.24
Hoxa4P06798 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.34□□□□□ -1.24
Hoxa4P06798 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.34□□□□□ -1.24
Hoxa4P06798 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Hoxa4P06798 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Hoxa4P06798 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms