Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Mir3068-201ENSMUST00000083004 136 ntBASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col16a1Q8BLX7 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm15203-201ENSMUST00000117668 455 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm23430-201ENSMUST00000122490 314 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Mir1953-201ENSMUST00000157866 89 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm29141-201ENSMUST00000190357 882 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm38022-201ENSMUST00000191762 403 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.61□□□□□ -0.87
Col16a1Q8BLX7 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Gm16276-201ENSMUST00000131218 262 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Gm9672-201ENSMUST00000166437 425 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Gm44411-201ENSMUST00000204172 349 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Gm18469-201ENSMUST00000208850 439 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 AC154806.2-201ENSMUST00000227212 2385 ntBASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC9.6□□□□□ -0.87
Col16a1Q8BLX7 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm15349-201ENSMUST00000121154 204 ntBASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm15164-201ENSMUST00000122203 271 ntBASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm25969-201ENSMUST00000157166 132 ntBASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm37295-201ENSMUST00000192186 109 ntBASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Gm37177-201ENSMUST00000193768 417 ntBASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col16a1Q8BLX7 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms