Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm12297-201ENSMUST00000121380 979 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm25266-201ENSMUST00000158521 304 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm7031-201ENSMUST00000173709 919 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm27972-201ENSMUST00000184720 137 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm8524-201ENSMUST00000186232 379 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm37295-201ENSMUST00000192186 109 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm37469-201ENSMUST00000193728 890 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm35108-201ENSMUST00000194321 699 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm33191-201ENSMUST00000195604 699 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm40319-201ENSMUST00000199785 481 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.31□□□□□ -1.08
Rrp1P56183 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.31□□□□□ -1.08
Rrp1P56183 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.31□□□□□ -1.08
Rrp1P56183 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.31□□□□□ -1.08
Rrp1P56183 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rrp1P56183 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rrp1P56183 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.31□□□□□ -1.08
Rrp1P56183 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.3□□□□□ -1.08
Rrp1P56183 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rrp1P56183 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm7785-201ENSMUST00000117121 892 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Gm8084-201ENSMUST00000120807 752 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Gm25178-201ENSMUST00000122633 325 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.3□□□□□ -1.08
Rrp1P56183 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm37689-201ENSMUST00000193139 275 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Gm9354-201ENSMUST00000209075 468 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm10805-201ENSMUST00000099710 399 ntBASIC8.3□□□□□ -1.08
Rrp1P56183 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rrp1P56183 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rrp1P56183 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rrp1P56183 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rrp1P56183 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rrp1P56183 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm5605-201ENSMUST00000208940 1305 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.29□□□□□ -1.08
Rrp1P56183 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rrp1P56183 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm13282-201ENSMUST00000121577 545 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.29□□□□□ -1.08
Rrp1P56183 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm25164-201ENSMUST00000158908 116 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm21182-201ENSMUST00000178899 794 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm5445-201ENSMUST00000180224 480 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm37349-201ENSMUST00000194205 624 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.29□□□□□ -1.08
Rrp1P56183 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rrp1P56183 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms