Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm23323-201ENSMUST00000104471 133 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm5759-201ENSMUST00000119203 811 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm27617-201ENSMUST00000184321 168 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm44356-201ENSMUST00000196731 111 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm43558-201ENSMUST00000200155 210 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm45900-201ENSMUST00000211879 409 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Grik1-210ENSMUST00000228034 2708 ntBASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rprd1aQ8VDS4 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.71□□□□□ -1.17
Rprd1aQ8VDS4 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm23701-201ENSMUST00000103893 110 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm11810-201ENSMUST00000118311 333 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm14480-201ENSMUST00000118521 433 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm17973-201ENSMUST00000174509 520 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Mir6972-201ENSMUST00000184774 64 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm27458-201ENSMUST00000185108 121 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm29008-201ENSMUST00000189387 298 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm45506-201ENSMUST00000211620 280 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm24613-201ENSMUST00000083266 130 ntBASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.71□□□□□ -1.18
Rprd1aQ8VDS4 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms