Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm13521-201ENSMUST00000118922 866 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm24530-201ENSMUST00000157948 288 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm6838-201ENSMUST00000172851 582 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm28266-201ENSMUST00000191410 439 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm9652-201ENSMUST00000209345 163 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm26264-201ENSMUST00000083278 159 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm25189-201ENSMUST00000083911 164 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim17Q7TPM3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm25757-201ENSMUST00000103986 123 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm4919-201ENSMUST00000117825 604 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm2976-201ENSMUST00000160362 513 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm16102-201ENSMUST00000160955 420 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm5698-201ENSMUST00000178317 724 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm27458-201ENSMUST00000185108 121 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 AC157212.1-201ENSMUST00000228398 1075 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Glycam1-204ENSMUST00000228895 641 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm24696-201ENSMUST00000083878 134 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Klf5-202ENSMUST00000226784 2852 ntBASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim17Q7TPM3 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.93□□□□□ -1.14
Trim17Q7TPM3 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC7.93□□□□□ -1.14
Trim17Q7TPM3 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms