Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm25617-201ENSMUST00000179548 133 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Mir6989-201ENSMUST00000184812 65 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm25617-202ENSMUST00000198387 132 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm43033-201ENSMUST00000199682 425 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm34583-203ENSMUST00000202586 454 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 AC158388.1-201ENSMUST00000225441 256 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 AC137950.3-201ENSMUST00000228250 246 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 AC163296.2-201ENSMUST00000220177 1315 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm37570-201ENSMUST00000195411 3106 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smarcc1P97496 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smarcc1P97496 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm8046-201ENSMUST00000172151 616 ntBASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm26238-201ENSMUST00000175538 117 ntBASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm7412-201ENSMUST00000191692 605 ntBASIC9.47□□□□□ -0.89
Smarcc1P97496 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC9.47□□□□□ -0.89
Smarcc1P97496 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.47□□□□□ -0.89
Smarcc1P97496 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smarcc1P97496 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 AC151901.1-201ENSMUST00000218274 180 ntBASIC9.47□□□□□ -0.89
Smarcc1P97496 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.47□□□□□ -0.89
Smarcc1P97496 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC9.47□□□□□ -0.89
Smarcc1P97496 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.47□□□□□ -0.89
Smarcc1P97496 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smarcc1P97496 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.47□□□□□ -0.89
Smarcc1P97496 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC9.46□□□□□ -0.89
Smarcc1P97496 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Smarcc1P97496 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Smarcc1P97496 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.46□□□□□ -0.89
Smarcc1P97496 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC9.46□□□□□ -0.89
Smarcc1P97496 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.46□□□□□ -0.89
Smarcc1P97496 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smarcc1P97496 AC138284.3-201ENSMUST00000217345 4663 ntBASIC9.46□□□□□ -0.89
Smarcc1P97496 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms