Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.16□□□□□ -1.42
Col8a2P25318 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC6.16□□□□□ -1.42
Col8a2P25318 Gm6667-201ENSMUST00000217169 564 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 Gm8275-201ENSMUST00000219732 424 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 Gm18960-201ENSMUST00000222962 713 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col8a2P25318 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Col8a2P25318 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Col8a2P25318 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col8a2P25318 Gm29113-201ENSMUST00000185991 3432 ntBASIC6.16□□□□□ -1.42
Col8a2P25318 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col8a2P25318 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.15□□□□□ -1.42
Col8a2P25318 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col8a2P25318 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a2P25318 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Gm13622-201ENSMUST00000120658 433 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a2P25318 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col8a2P25318 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.15□□□□□ -1.42
Col8a2P25318 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm26179-201ENSMUST00000177723 132 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm26784-201ENSMUST00000181666 410 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm9381-201ENSMUST00000182285 1012 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Gm29496-201ENSMUST00000189854 693 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm18690-201ENSMUST00000204488 985 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm44590-201ENSMUST00000206161 391 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a2P25318 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm45478-201ENSMUST00000209472 211 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a2P25318 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 AC134913.1-201ENSMUST00000224563 504 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.15□□□□□ -1.42
Col8a2P25318 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a2P25318 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a2P25318 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.15□□□□□ -1.43
Col8a2P25318 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col8a2P25318 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Col8a2P25318 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.15□□□□□ -1.43
Col8a2P25318 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.15□□□□□ -1.43
Col8a2P25318 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.15□□□□□ -1.43
Col8a2P25318 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col8a2P25318 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a2P25318 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col8a2P25318 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a2P25318 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a2P25318 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a2P25318 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Col8a2P25318 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a2P25318 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a2P25318 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a2P25318 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a2P25318 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col8a2P25318 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms