Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Grik1-210ENSMUST00000228034 2708 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm22022-201ENSMUST00000104355 127 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm6754-201ENSMUST00000117124 913 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm16221-201ENSMUST00000117331 393 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm13915-201ENSMUST00000119314 931 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm12593-201ENSMUST00000120981 743 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm11258-201ENSMUST00000121086 1218 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm16523-201ENSMUST00000121253 592 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm14603-201ENSMUST00000121275 448 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm24530-201ENSMUST00000157948 288 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm8185-201ENSMUST00000160999 669 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm4246-201ENSMUST00000172822 216 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Mir3078-201ENSMUST00000175231 87 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm9149-201ENSMUST00000182724 1007 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Mir6340-201ENSMUST00000183857 119 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm40319-201ENSMUST00000199785 481 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm18378-201ENSMUST00000216245 628 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Olfr888-201ENSMUST00000075228 945 ntBASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cstf3Q99LI7 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 AC132384.7-201ENSMUST00000220198 1391 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm14749-201ENSMUST00000121269 333 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm16407-201ENSMUST00000122134 567 ntBASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Cstf3Q99LI7 Gm22408-201ENSMUST00000174925 65 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms