Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC8.8□□□□□ -1
Gm28047Q3US59 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 AC154738.2-201ENSMUST00000227403 1110 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm4953-201ENSMUST00000077309 483 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Gm28047Q3US59 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm5605-201ENSMUST00000208940 1305 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm22150-201ENSMUST00000104447 135 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm5228-201ENSMUST00000117186 357 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm14826-201ENSMUST00000121284 901 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm26595-201ENSMUST00000181585 484 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Mir6974-201ENSMUST00000184381 83 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm43008-201ENSMUST00000202346 286 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm18160-201ENSMUST00000214279 827 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.79□□□□□ -1
Gm28047Q3US59 Gm5668-201ENSMUST00000220897 436 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Gm46317-201ENSMUST00000221103 393 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.79□□□□□ -1
Gm28047Q3US59 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.79□□□□□ -1
Gm28047Q3US59 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Gm28047Q3US59 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.79□□□□□ -1
Gm28047Q3US59 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Gm28047Q3US59 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.79□□□□□ -1
Gm28047Q3US59 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.79□□□□□ -1
Gm28047Q3US59 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Gm28047Q3US59 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Gm28047Q3US59 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.78□□□□□ -1
Gm28047Q3US59 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Gm28047Q3US59 Gm12838-201ENSMUST00000116278 325 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm14480-201ENSMUST00000118521 433 ntBASIC8.78□□□□□ -1
Gm28047Q3US59 Gm12844-201ENSMUST00000119463 582 ntBASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms