Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm29385-201ENSMUST00000186831 363 ntBASIC8.83□□□□□ -1
Col5a2Q3U962 Gm18799-201ENSMUST00000189104 913 ntBASIC8.83□□□□□ -1
Col5a2Q3U962 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col5a2Q3U962 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.83□□□□□ -1
Col5a2Q3U962 Gm44896-201ENSMUST00000206190 772 ntBASIC8.83□□□□□ -1
Col5a2Q3U962 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.83□□□□□ -1
Col5a2Q3U962 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col5a2Q3U962 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.83□□□□□ -1
Col5a2Q3U962 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.83□□□□□ -1
Col5a2Q3U962 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.83□□□□□ -1
Col5a2Q3U962 AC134917.2-201ENSMUST00000223354 124 ntBASIC8.83□□□□□ -1
Col5a2Q3U962 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.83□□□□□ -1
Col5a2Q3U962 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col5a2Q3U962 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col5a2Q3U962 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col5a2Q3U962 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col5a2Q3U962 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col5a2Q3U962 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm22256-201ENSMUST00000102291 107 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col5a2Q3U962 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.82□□□□□ -1
Col5a2Q3U962 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm11585-201ENSMUST00000120901 569 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm9285-201ENSMUST00000177691 697 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 AC122844.1-201ENSMUST00000195971 107 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC8.82□□□□□ -1
Col5a2Q3U962 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Gm35638-201ENSMUST00000220724 652 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.82□□□□□ -1
Col5a2Q3U962 AC154171.3-201ENSMUST00000224519 2505 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Mrpl48-201ENSMUST00000064334 1865 ntBASIC8.82□□□□□ -1
Col5a2Q3U962 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col5a2Q3U962 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col5a2Q3U962 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Col5a2Q3U962 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col5a2Q3U962 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm25498-201ENSMUST00000104424 129 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.81□□□□□ -1
Col5a2Q3U962 Gm14891-201ENSMUST00000117378 596 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Mir6971-201ENSMUST00000183497 63 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm7867-201ENSMUST00000189856 546 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm37177-201ENSMUST00000193768 417 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.81□□□□□ -1
Col5a2Q3U962 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Gm2754-201ENSMUST00000223383 589 ntBASIC8.81□□□□□ -1
Col5a2Q3U962 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col5a2Q3U962 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Col5a2Q3U962 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col5a2Q3U962 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms