Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.42□□□□□ -1.06
Sh3bp1P55194 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.42□□□□□ -1.06
Sh3bp1P55194 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.42□□□□□ -1.06
Sh3bp1P55194 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Sh3bp1P55194 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm44843-201ENSMUST00000208320 1396 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm37254-201ENSMUST00000193542 3901 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm24257-201ENSMUST00000104472 131 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm13573-201ENSMUST00000116410 631 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm6382-201ENSMUST00000118873 942 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm22562-201ENSMUST00000157334 111 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Mir3060-201ENSMUST00000175339 83 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm29145-201ENSMUST00000189914 456 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 AV026068-218ENSMUST00000223980 575 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm7086-202ENSMUST00000228849 506 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm10540-201ENSMUST00000097581 276 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 AC165080.3-201ENSMUST00000217162 3116 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm37685-201ENSMUST00000193507 2177 ntBASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Sh3bp1P55194 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm13458-201ENSMUST00000118239 367 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm12098-201ENSMUST00000118277 508 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm12604-201ENSMUST00000118382 380 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm5319-201ENSMUST00000118965 873 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Mir6999-201ENSMUST00000183498 61 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm5575-201ENSMUST00000190879 398 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm42861-201ENSMUST00000199596 634 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm9110-201ENSMUST00000219035 617 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Gm21321-201ENSMUST00000220179 446 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 AC124103.1-201ENSMUST00000227564 1027 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 AC147096.1-201ENSMUST00000227648 352 ntBASIC8.4□□□□□ -1.06
Sh3bp1P55194 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sh3bp1P55194 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.4□□□□□ -1.06
Sh3bp1P55194 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Sh3bp1P55194 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Sh3bp1P55194 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms