Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm44971-201ENSMUST00000206192 337 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC8.22□□□□□ -1.09
Sox1P53783 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm7351-201ENSMUST00000210745 580 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm3800-201ENSMUST00000221086 554 ntBASIC8.22□□□□□ -1.09
Sox1P53783 AC192616.1-201ENSMUST00000221922 132 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Sox1P53783 Gm5250-201ENSMUST00000059065 321 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Sox1P53783 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Ube2nl-201ENSMUST00000085228 456 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gm10247-201ENSMUST00000090395 333 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm44627-201ENSMUST00000206739 1531 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm8173-201ENSMUST00000186797 1977 ntBASIC8.22□□□□□ -1.09
Sox1P53783 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Sox1P53783 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sox1P53783 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC8.22□□□□□ -1.09
Sox1P53783 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 Il12b-202ENSMUST00000170513 1944 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
Sox1P53783 Sfmbt1-202ENSMUST00000112184 2936 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Sox1P53783 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Slc14a1-202ENSMUST00000160292 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Lekr1-201ENSMUST00000099075 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sox1P53783 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC8.21□□□□□ -1.1
Sox1P53783 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.21□□□□□ -1.1
Sox1P53783 Gm15105-201ENSMUST00000117777 204 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm22143-201ENSMUST00000157401 203 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm25557-201ENSMUST00000158084 315 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm7244-201ENSMUST00000164658 455 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm8340-201ENSMUST00000165508 1191 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm7352-201ENSMUST00000167577 1192 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Gm21877-201ENSMUST00000185640 694 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Gm28503-201ENSMUST00000185966 147 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 Gm28117-201ENSMUST00000188472 371 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm6074-201ENSMUST00000193340 451 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC8.21□□□□□ -1.1
Sox1P53783 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.21□□□□□ -1.1
Sox1P53783 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Sox1P53783 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 St7-201ENSMUST00000000674 1818 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 4933431E20Rik-210ENSMUST00000152663 2358 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.21□□□□□ -1.1
Sox1P53783 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Gm37069-201ENSMUST00000192742 4142 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Hnrnpc-209ENSMUST00000228198 2498 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Sox1P53783 AC154171.3-201ENSMUST00000224519 2505 ntBASIC8.21□□□□□ -1.1
Sox1P53783 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sox1P53783 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Sox1P53783 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Sox1P53783 Gm28653-201ENSMUST00000185494 5276 ntBASIC8.2□□□□□ -1.1
Sox1P53783 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Sox1P53783 Kin-201ENSMUST00000042512 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sox1P53783 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms