Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
TfamP40630 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TfamP40630 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TfamP40630 Gm14380-201ENSMUST00000122298 431 ntBASIC7.18□□□□□ -1.26
TfamP40630 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Gm15251-201ENSMUST00000177947 883 ntBASIC7.18□□□□□ -1.26
TfamP40630 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.18□□□□□ -1.26
TfamP40630 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.18□□□□□ -1.26
TfamP40630 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.18□□□□□ -1.26
TfamP40630 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.18□□□□□ -1.26
TfamP40630 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.18□□□□□ -1.26
TfamP40630 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TfamP40630 Olfr888-201ENSMUST00000075228 945 ntBASIC7.18□□□□□ -1.26
TfamP40630 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.18□□□□□ -1.26
TfamP40630 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 AC132384.7-201ENSMUST00000220198 1391 ntBASIC7.18□□□□□ -1.26
TfamP40630 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TfamP40630 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TfamP40630 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
TfamP40630 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.17□□□□□ -1.26
TfamP40630 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Grik1-210ENSMUST00000228034 2708 ntBASIC7.17□□□□□ -1.26
TfamP40630 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.17□□□□□ -1.26
TfamP40630 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TfamP40630 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TfamP40630 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.17□□□□□ -1.26
TfamP40630 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC7.17□□□□□ -1.26
TfamP40630 Gm24011-201ENSMUST00000157732 268 ntBASIC7.17□□□□□ -1.26
TfamP40630 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.17□□□□□ -1.26
TfamP40630 Mir6415-201ENSMUST00000184064 100 ntBASIC7.17□□□□□ -1.26
TfamP40630 Gm29168-201ENSMUST00000189953 687 ntBASIC7.17□□□□□ -1.26
TfamP40630 Gm42431-201ENSMUST00000196880 323 ntBASIC7.17□□□□□ -1.26
TfamP40630 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.17□□□□□ -1.26
TfamP40630 Gm43542-201ENSMUST00000199505 379 ntBASIC7.17□□□□□ -1.26
TfamP40630 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Gm45432-201ENSMUST00000210391 416 ntBASIC7.17□□□□□ -1.26
TfamP40630 Gm18292-201ENSMUST00000216673 919 ntBASIC7.17□□□□□ -1.26
TfamP40630 Gm8058-201ENSMUST00000217247 587 ntBASIC7.17□□□□□ -1.26
TfamP40630 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.17□□□□□ -1.26
TfamP40630 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.17□□□□□ -1.26
TfamP40630 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.17□□□□□ -1.26
TfamP40630 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TfamP40630 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TfamP40630 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.17□□□□□ -1.26
TfamP40630 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.17□□□□□ -1.26
TfamP40630 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TfamP40630 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TfamP40630 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.17□□□□□ -1.26
TfamP40630 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.17□□□□□ -1.26
TfamP40630 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TfamP40630 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.16□□□□□ -1.26
TfamP40630 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TfamP40630 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.16□□□□□ -1.26
TfamP40630 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TfamP40630 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TfamP40630 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TfamP40630 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.16□□□□□ -1.26
TfamP40630 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
TfamP40630 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms