Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.76□□□□□ -1.01
Traf1P39428 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.76□□□□□ -1.01
Traf1P39428 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.76□□□□□ -1.01
Traf1P39428 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.76□□□□□ -1.01
Traf1P39428 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.76□□□□□ -1.01
Traf1P39428 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Traf1P39428 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.76□□□□□ -1.01
Traf1P39428 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Traf1P39428 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Traf1P39428 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Traf1P39428 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Gm5759-201ENSMUST00000119203 811 ntBASIC8.75□□□□□ -1.01
Traf1P39428 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm14612-201ENSMUST00000121522 881 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.75□□□□□ -1.01
Traf1P39428 Gm11962-201ENSMUST00000145746 255 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.75□□□□□ -1.01
Traf1P39428 Gm24782-201ENSMUST00000157641 132 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm38170-201ENSMUST00000195404 816 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm42464-202ENSMUST00000198111 774 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.75□□□□□ -1.01
Traf1P39428 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.75□□□□□ -1.01
Traf1P39428 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Traf1P39428 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.75□□□□□ -1.01
Traf1P39428 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Traf1P39428 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Traf1P39428 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.74□□□□□ -1.01
Traf1P39428 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.74□□□□□ -1.01
Traf1P39428 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.74□□□□□ -1.01
Traf1P39428 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Gm25614-201ENSMUST00000104013 133 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.74□□□□□ -1.01
Traf1P39428 Gm14201-201ENSMUST00000117627 289 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm12459-201ENSMUST00000120659 356 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm11585-201ENSMUST00000120901 569 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.74□□□□□ -1.01
Traf1P39428 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.74□□□□□ -1.01
Traf1P39428 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Mir6409-201ENSMUST00000184957 92 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm29008-201ENSMUST00000189387 298 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm29143-201ENSMUST00000189462 201 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm43664-201ENSMUST00000196038 734 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Traf1P39428 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.74□□□□□ -1.01
Traf1P39428 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.74□□□□□ -1.01
Traf1P39428 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.74□□□□□ -1.01
Traf1P39428 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Traf1P39428 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.74□□□□□ -1.01
Traf1P39428 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.74□□□□□ -1.01
Traf1P39428 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms