Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23276-201ENSMUST00000157913 138 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm26379-201ENSMUST00000178125 138 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm6100-201ENSMUST00000180253 403 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm26729-201ENSMUST00000180744 352 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm27043-201ENSMUST00000182807 958 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm44033-201ENSMUST00000203699 695 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.96□□□□□ -1.46
Sdc1P18828 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm19161-201ENSMUST00000217958 737 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC5.96□□□□□ -1.46
Sdc1P18828 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 AC116487.1-201ENSMUST00000227033 339 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 AC107452.2-201ENSMUST00000228415 363 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm15500-201ENSMUST00000071523 894 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.96□□□□□ -1.46
Sdc1P18828 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm43623-201ENSMUST00000199289 2663 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sdc1P18828 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm22438-201ENSMUST00000104049 132 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm23132-201ENSMUST00000104254 132 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm23706-201ENSMUST00000104369 82 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC5.95□□□□□ -1.46
Sdc1P18828 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC5.95□□□□□ -1.46
Sdc1P18828 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm14745-201ENSMUST00000118480 1096 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm12192-201ENSMUST00000120146 487 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm12593-201ENSMUST00000120981 743 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm23563-201ENSMUST00000174900 251 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm25998-201ENSMUST00000175397 53 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm5147-201ENSMUST00000185999 794 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm28443-201ENSMUST00000189081 698 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm42525-201ENSMUST00000196257 527 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm18485-201ENSMUST00000203788 1114 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm45299-201ENSMUST00000210199 420 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 AC159899.1-201ENSMUST00000214024 733 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sdc1P18828 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Sdc1P18828 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC5.95□□□□□ -1.46
Sdc1P18828 AC159006.3-201ENSMUST00000226918 664 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 AC121357.1-201ENSMUST00000227365 608 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC5.95□□□□□ -1.46
Sdc1P18828 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sdc1P18828 Olfr890-201ENSMUST00000079804 945 ntBASIC5.95□□□□□ -1.46
Sdc1P18828 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms