Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.1□□□□□ -1.43
Cdx1P18111 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx1P18111 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cdx1P18111 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Cdx1P18111 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdx1P18111 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdx1P18111 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdx1P18111 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 AC126251.1-201ENSMUST00000228170 2707 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdx1P18111 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm22271-201ENSMUST00000104035 128 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm23485-201ENSMUST00000104181 155 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm5319-201ENSMUST00000118965 873 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm25780-201ENSMUST00000122528 253 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm8974-201ENSMUST00000175770 479 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm9399-201ENSMUST00000175771 639 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Mir5625-201ENSMUST00000176598 80 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm18828-201ENSMUST00000180475 857 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm9149-201ENSMUST00000182724 1007 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm27158-201ENSMUST00000183813 238 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdx1P18111 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm29739-201ENSMUST00000191760 529 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm43709-201ENSMUST00000199870 559 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm42558-201ENSMUST00000200982 265 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdx1P18111 CT030646.1-201ENSMUST00000225049 980 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Fabp5l2-201ENSMUST00000072582 408 ntBASIC6.09□□□□□ -1.43
Cdx1P18111 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdx1P18111 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Cdx1P18111 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx1P18111 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC6.09□□□□□ -1.44
Cdx1P18111 Gm45292-201ENSMUST00000211232 2207 ntBASIC6.09□□□□□ -1.44
Cdx1P18111 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms