Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm18995-201ENSMUST00000202981 520 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Gm43953-201ENSMUST00000203709 2867 ntBASIC8.39□□□□□ -1.07
Ccdc38Q8CDN8 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm22022-201ENSMUST00000104355 127 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm15836-201ENSMUST00000119952 793 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm23220-201ENSMUST00000158115 137 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm10805-201ENSMUST00000099710 399 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc38Q8CDN8 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm11622-201ENSMUST00000120525 691 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Mir1983-201ENSMUST00000157523 132 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm8004-201ENSMUST00000187782 617 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm29195-201ENSMUST00000189038 379 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm42424-201ENSMUST00000198319 376 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm40319-201ENSMUST00000199785 481 ntBASIC8.37□□□□□ -1.07
Ccdc38Q8CDN8 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms