Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.65□□□□□ -1.18
Trub1Q8C0D0 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.65□□□□□ -1.18
Trub1Q8C0D0 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trub1Q8C0D0 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trub1Q8C0D0 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trub1Q8C0D0 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.65□□□□□ -1.19
Trub1Q8C0D0 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trub1Q8C0D0 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trub1Q8C0D0 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trub1Q8C0D0 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trub1Q8C0D0 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trub1Q8C0D0 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm15481-201ENSMUST00000120264 539 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm12124-201ENSMUST00000120504 679 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm11259-201ENSMUST00000120554 715 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm13282-201ENSMUST00000121577 545 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm37225-201ENSMUST00000193423 325 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm35108-201ENSMUST00000194321 699 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm33191-201ENSMUST00000195604 699 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm31579-201ENSMUST00000203306 966 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Gm37924-201ENSMUST00000195470 3647 ntBASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trub1Q8C0D0 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm15576-201ENSMUST00000117806 583 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm7831-201ENSMUST00000117990 552 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm22795-201ENSMUST00000157233 118 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm43235-201ENSMUST00000200121 297 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm43558-201ENSMUST00000200155 210 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm6807-201ENSMUST00000077435 888 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Trub1Q8C0D0 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms