Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf8Q6DID3 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm26562-201ENSMUST00000181113 2010 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 CT025618.1-202ENSMUST00000226439 1758 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm38066-201ENSMUST00000193223 1634 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Atp7b-202ENSMUST00000110738 4044 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm11797-201ENSMUST00000121336 754 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm12163-201ENSMUST00000121597 389 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm5644-201ENSMUST00000122039 465 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm12368-201ENSMUST00000122251 434 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm22025-201ENSMUST00000122734 302 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Mir1981-201ENSMUST00000157934 82 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm17047-201ENSMUST00000167709 430 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm4781-201ENSMUST00000167995 781 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm27588-201ENSMUST00000185096 263 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm28573-201ENSMUST00000187821 380 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm28400-201ENSMUST00000191332 380 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm43934-201ENSMUST00000205095 388 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm44665-201ENSMUST00000205381 251 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm45673-201ENSMUST00000210293 358 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 AC133654.1-201ENSMUST00000228411 672 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Pfdn5-202ENSMUST00000062492 464 ntTSL 3 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 AC142266.1-202ENSMUST00000227784 3733 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Gm37699-201ENSMUST00000194753 3338 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Ccdc86-201ENSMUST00000025639 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Oprl1-202ENSMUST00000108763 2971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Nedd4l-211ENSMUST00000226058 3393 ntBASIC9.94□□□□□ -0.82
Scaf8Q6DID3 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf8Q6DID3 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm37010-201ENSMUST00000194539 1704 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm12142-201ENSMUST00000117114 485 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm13407-201ENSMUST00000118256 360 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Mup-ps16-201ENSMUST00000120085 596 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm5181-201ENSMUST00000183140 971 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm27317-201ENSMUST00000183533 95 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm17895-201ENSMUST00000194028 874 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm37585-201ENSMUST00000195440 280 ntBASIC9.93□□□□□ -0.82
Scaf8Q6DID3 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC9.93□□□□□ -0.82
Scaf8Q6DID3 AC165349.2-201ENSMUST00000219097 426 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms