Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm22934-201ENSMUST00000103961 132 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm15576-201ENSMUST00000117806 583 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm11343-201ENSMUST00000120579 599 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm6799-201ENSMUST00000186919 573 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm7891-201ENSMUST00000190284 843 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm17970-201ENSMUST00000192199 685 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm18378-201ENSMUST00000216245 628 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim43aQ3TL54 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim43aQ3TL54 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm7785-201ENSMUST00000117121 892 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm15422-201ENSMUST00000117453 541 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm14414-201ENSMUST00000120833 573 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm9149-201ENSMUST00000182724 1007 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm31579-201ENSMUST00000203306 966 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm5948-201ENSMUST00000219627 839 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim43aQ3TL54 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm37968-201ENSMUST00000195131 3201 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms