Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Tpm1P58771 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Tpm1P58771 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Tpm1P58771 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Tpm1P58771 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Tpm1P58771 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm16221-201ENSMUST00000117331 393 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm15422-201ENSMUST00000117453 541 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm15355-201ENSMUST00000118929 285 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm13828-201ENSMUST00000122278 363 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm15501-202ENSMUST00000140687 625 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm8813-201ENSMUST00000155930 595 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm8167-201ENSMUST00000183320 958 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm18970-201ENSMUST00000186040 938 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm36982-201ENSMUST00000193796 1128 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm8010-201ENSMUST00000194128 873 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm45432-201ENSMUST00000210391 416 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
Tpm1P58771 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC8.21□□□□□ -1.1
Tpm1P58771 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.21□□□□□ -1.1
Tpm1P58771 AC207128.1-201ENSMUST00000225928 799 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm7086-202ENSMUST00000228849 506 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.21□□□□□ -1.1
Tpm1P58771 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Tpm1P58771 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Tpm1P58771 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Gm12593-201ENSMUST00000120981 743 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm10012-202ENSMUST00000170379 372 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm37929-201ENSMUST00000195116 493 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.2□□□□□ -1.1
Tpm1P58771 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.2□□□□□ -1.1
Tpm1P58771 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.2□□□□□ -1.1
Tpm1P58771 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm25259-201ENSMUST00000083048 193 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Gm37033-201ENSMUST00000193199 7350 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.2□□□□□ -1.1
Tpm1P58771 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Tpm1P58771 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Tpm1P58771 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Tpm1P58771 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms