Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm15047-201ENSMUST00000118891 454 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm5711-201ENSMUST00000197896 421 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Gm19206-201ENSMUST00000186401 827 ntBASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Gm2011-203ENSMUST00000203750 435 ntBASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
Col6a3E9PWQ3 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm13641-201ENSMUST00000117993 473 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm15502-201ENSMUST00000121449 208 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm25271-201ENSMUST00000157273 290 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm5456-201ENSMUST00000170706 844 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm17045-201ENSMUST00000178600 844 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm46369-201ENSMUST00000221577 401 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm8256-203ENSMUST00000228692 591 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Drosha-207ENSMUST00000169061 4570 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col6a3E9PWQ3 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm13428-201ENSMUST00000117540 365 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm14070-201ENSMUST00000120773 428 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm18562-201ENSMUST00000209949 915 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm13533-201ENSMUST00000121104 177 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 AC123832.2-201ENSMUST00000215151 129 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 AC101875.1-201ENSMUST00000222666 2223 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms