Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc47Q9D024 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Npr3-204ENSMUST00000228489 1969 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm23529-201ENSMUST00000104562 132 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm15049-201ENSMUST00000120474 463 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm27542-201ENSMUST00000184184 256 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Ccdc47Q9D024 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc47Q9D024 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.81□□□□□ -1
Ccdc47Q9D024 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm5605-201ENSMUST00000208940 1305 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm11895-201ENSMUST00000122165 467 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm26407-201ENSMUST00000158504 307 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccdc47Q9D024 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm28728-201ENSMUST00000189087 405 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc47Q9D024 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC8.8□□□□□ -1
Ccdc47Q9D024 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.8□□□□□ -1
Ccdc47Q9D024 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc47Q9D024 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc47Q9D024 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms