Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm11850-201ENSMUST00000119679 479 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm23392-201ENSMUST00000157580 113 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm26945-201ENSMUST00000183191 2011 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm3121-201ENSMUST00000187086 406 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm37270-201ENSMUST00000194277 330 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm7394-201ENSMUST00000209138 1032 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Gm2089-201ENSMUST00000218294 479 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 AC154747.4-201ENSMUST00000224802 903 ntBASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Atxn3Q9CVD2 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Mir503-201ENSMUST00000102168 71 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm11263-201ENSMUST00000121853 749 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm22795-201ENSMUST00000157233 118 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm23139-201ENSMUST00000179454 132 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm18562-201ENSMUST00000209949 915 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Snhg17-209ENSMUST00000186993 3144 ntBASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Atxn3Q9CVD2 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm28651-202ENSMUST00000227968 2693 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm43168-201ENSMUST00000201039 1612 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm11371-201ENSMUST00000120294 385 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm11945-201ENSMUST00000120551 476 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm14787-201ENSMUST00000121236 388 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Gm8046-201ENSMUST00000172151 616 ntBASIC9.5□□□□□ -0.89
Atxn3Q9CVD2 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms