Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm42897-201ENSMUST00000201486 2112 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Rmi1-205ENSMUST00000225828 3594 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm15754-201ENSMUST00000119191 478 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm13877-201ENSMUST00000120614 417 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm14186-201ENSMUST00000120804 137 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm29273-201ENSMUST00000188880 262 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm37438-201ENSMUST00000192813 393 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm6064-201ENSMUST00000203999 454 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm34701-201ENSMUST00000204213 849 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm43922-201ENSMUST00000205071 328 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm18599-201ENSMUST00000206729 1125 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm45343-201ENSMUST00000210452 828 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm46311-201ENSMUST00000217971 203 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 AC132384.13-201ENSMUST00000219556 1159 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Mir146b-201ENSMUST00000093619 109 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Gm28653-201ENSMUST00000185494 5276 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC8.57□□□□□ -1.04
Clp1Q99LI9 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Clp1Q99LI9 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm45629-201ENSMUST00000209629 2546 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 AC122346.1-202ENSMUST00000225586 2116 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm38012-201ENSMUST00000193022 3029 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm13768-201ENSMUST00000116469 929 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm13739-201ENSMUST00000118020 530 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm13726-201ENSMUST00000121278 794 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.56□□□□□ -1.04
Clp1Q99LI9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms