Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm11877-201ENSMUST00000118921 852 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm12929-201ENSMUST00000122406 370 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm25971-201ENSMUST00000158953 286 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm18290-201ENSMUST00000202900 844 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm34701-201ENSMUST00000204213 849 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm44213-201ENSMUST00000204977 703 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 AC105169.1-201ENSMUST00000218912 1294 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm19186-201ENSMUST00000219922 333 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm29761-201ENSMUST00000215964 1939 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm38249-201ENSMUST00000192560 2321 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 AC091783.1-201ENSMUST00000223614 1613 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm23437-201ENSMUST00000104036 127 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm26025-201ENSMUST00000158655 271 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm3585-201ENSMUST00000173438 875 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm5445-201ENSMUST00000180224 480 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm28980-201ENSMUST00000187877 219 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm43836-201ENSMUST00000196532 381 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm42634-201ENSMUST00000197362 381 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm42895-201ENSMUST00000200761 2996 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm17838-201ENSMUST00000205872 876 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 AC164437.4-202ENSMUST00000228794 2413 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
RtcbQ99LF4 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.57□□□□□ -0.88
RtcbQ99LF4 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RtcbQ99LF4 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC9.56□□□□□ -0.88
RtcbQ99LF4 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RtcbQ99LF4 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RtcbQ99LF4 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RtcbQ99LF4 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.56□□□□□ -0.88
RtcbQ99LF4 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RtcbQ99LF4 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RtcbQ99LF4 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RtcbQ99LF4 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
RtcbQ99LF4 Gm6743-201ENSMUST00000117345 1066 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms