Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm43555-201ENSMUST00000196588 310 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm44192-201ENSMUST00000204195 556 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim9Q8C7M3 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim9Q8C7M3 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.21□□□□□ -1.09
Trim9Q8C7M3 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm22438-201ENSMUST00000104049 132 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm5752-201ENSMUST00000117771 594 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm11810-201ENSMUST00000118311 333 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm5255-201ENSMUST00000120125 642 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm12123-201ENSMUST00000120348 472 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm11259-201ENSMUST00000120554 715 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm25947-201ENSMUST00000180343 110 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm37225-201ENSMUST00000193423 325 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm43590-201ENSMUST00000195987 387 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm43013-201ENSMUST00000198216 247 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm34583-203ENSMUST00000202586 454 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Olfr890-201ENSMUST00000079804 945 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Klf5-202ENSMUST00000226784 2852 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.21□□□□□ -1.1
Trim9Q8C7M3 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm14539-201ENSMUST00000117527 174 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm12124-201ENSMUST00000120504 679 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm13282-201ENSMUST00000121577 545 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm29008-201ENSMUST00000189387 298 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm19080-201ENSMUST00000196082 550 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm42965-201ENSMUST00000201254 250 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm43226-201ENSMUST00000202438 259 ntBASIC8.2□□□□□ -1.1
Trim9Q8C7M3 Gm31579-201ENSMUST00000203306 966 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms