Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm24050-201ENSMUST00000158623 290 ntBASIC7.62□□□□□ -1.19
HttP42859 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.62□□□□□ -1.19
HttP42859 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.62□□□□□ -1.19
HttP42859 Gm7554-201ENSMUST00000202282 574 ntBASIC7.62□□□□□ -1.19
HttP42859 Gm45497-201ENSMUST00000211701 740 ntBASIC7.62□□□□□ -1.19
HttP42859 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HttP42859 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.62□□□□□ -1.19
HttP42859 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HttP42859 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC7.62□□□□□ -1.19
HttP42859 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Klf5-202ENSMUST00000226784 2852 ntBASIC7.62□□□□□ -1.19
HttP42859 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Gm4919-201ENSMUST00000117825 604 ntBASIC7.62□□□□□ -1.19
HttP42859 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.62□□□□□ -1.19
HttP42859 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.62□□□□□ -1.19
HttP42859 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Gm27355-201ENSMUST00000185045 128 ntBASIC7.62□□□□□ -1.19
HttP42859 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.62□□□□□ -1.19
HttP42859 AC122372.1-201ENSMUST00000215344 280 ntBASIC7.62□□□□□ -1.19
HttP42859 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
HttP42859 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
HttP42859 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Gm5752-201ENSMUST00000117771 594 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm13878-201ENSMUST00000117986 577 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm12307-201ENSMUST00000120581 590 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm15959-201ENSMUST00000121724 368 ntBASIC7.61□□□□□ -1.19
HttP42859 Mir3572-201ENSMUST00000175549 86 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.61□□□□□ -1.19
HttP42859 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.61□□□□□ -1.19
HttP42859 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.61□□□□□ -1.19
HttP42859 CT025642.3-201ENSMUST00000225503 4086 ntBASIC7.61□□□□□ -1.19
HttP42859 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Gm6693-201ENSMUST00000189583 813 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.61□□□□□ -1.19
HttP42859 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.61□□□□□ -1.19
HttP42859 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.61□□□□□ -1.19
HttP42859 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.61□□□□□ -1.19
HttP42859 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.61□□□□□ -1.19
HttP42859 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 AC159205.7-201ENSMUST00000225988 692 ntBASIC7.61□□□□□ -1.19
HttP42859 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Mir193b-201ENSMUST00000103784 79 ntBASIC7.61□□□□□ -1.19
HttP42859 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 Gm6446-201ENSMUST00000120604 818 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm9286-201ENSMUST00000173586 508 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm25574-201ENSMUST00000175245 249 ntBASIC7.61□□□□□ -1.19
HttP42859 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HttP42859 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm24451-201ENSMUST00000083353 133 ntBASIC7.61□□□□□ -1.19
HttP42859 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Prdm2-201ENSMUST00000105778 7304 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC7.6□□□□□ -1.19
HttP42859 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HttP42859 Scarna6-201ENSMUST00000158656 265 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms