Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Col18a1P39061 Rcbtb2-209ENSMUST00000164822 3531 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 AC154347.1-201ENSMUST00000221358 3105 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Gm37829-201ENSMUST00000193864 2213 ntBASIC9.79□□□□□ -0.84
Col18a1P39061 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Col18a1P39061 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col18a1P39061 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm26429-201ENSMUST00000104829 110 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm15194-201ENSMUST00000120453 434 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Gm2986-201ENSMUST00000121603 382 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Gm22655-201ENSMUST00000174949 96 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Gm29013-201ENSMUST00000187431 237 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 AC122309.1-201ENSMUST00000226945 421 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col18a1P39061 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC9.78□□□□□ -0.84
Col18a1P39061 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm44937-201ENSMUST00000207705 2691 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 AC107763.1-202ENSMUST00000225021 2663 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm15203-201ENSMUST00000117668 455 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC9.78□□□□□ -0.84
Col18a1P39061 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col18a1P39061 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col18a1P39061 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC9.77□□□□□ -0.84
Col18a1P39061 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col18a1P39061 Gm42668-201ENSMUST00000200747 2487 ntBASIC9.77□□□□□ -0.84
Col18a1P39061 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 AC155710.1-201ENSMUST00000219913 1353 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Col18a1P39061 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC9.77□□□□□ -0.85
Col18a1P39061 Gm24395-201ENSMUST00000158139 125 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 Gm24228-201ENSMUST00000158829 129 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
Col18a1P39061 Gm20620-201ENSMUST00000177528 168 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 Gm4373-201ENSMUST00000178571 556 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC9.77□□□□□ -0.85
Col18a1P39061 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Gm42474-201ENSMUST00000201073 505 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 Gm7499-201ENSMUST00000210423 813 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 AC153961.1-201ENSMUST00000217760 385 ntBASIC9.77□□□□□ -0.85
Col18a1P39061 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC9.77□□□□□ -0.85
Col18a1P39061 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Col18a1P39061 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col18a1P39061 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Col18a1P39061 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col18a1P39061 Gm38277-201ENSMUST00000195172 1367 ntBASIC9.76□□□□□ -0.85
Col18a1P39061 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col18a1P39061 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col18a1P39061 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col18a1P39061 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC9.76□□□□□ -0.85
Col18a1P39061 Gm8061-201ENSMUST00000122380 350 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms