Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 AC132412.1-201ENSMUST00000204155 2724 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm12310-201ENSMUST00000118013 492 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm14607-201ENSMUST00000119119 491 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm15049-201ENSMUST00000120474 463 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm7191-201ENSMUST00000182678 990 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Txn-ps1-201ENSMUST00000186385 309 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm29577-201ENSMUST00000186427 693 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm28573-201ENSMUST00000187821 380 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm28400-201ENSMUST00000191332 380 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm17979-201ENSMUST00000196646 611 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm42429-201ENSMUST00000198579 558 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm43659-201ENSMUST00000200894 628 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm30646-201ENSMUST00000207662 180 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 AC153968.1-201ENSMUST00000215584 334 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm18243-201ENSMUST00000220756 887 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm9973-202ENSMUST00000220926 166 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm9280-201ENSMUST00000223155 517 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 CT009556.2-201ENSMUST00000227980 1123 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 AC137902.2-201ENSMUST00000227989 576 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm9788-201ENSMUST00000057038 906 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Olfr888-201ENSMUST00000075228 945 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm24143-201ENSMUST00000082633 145 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.63□□□□□ -1.03
Hoxd8P23463 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Hoxd8P23463 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd8P23463 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Hoxd8P23463 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Fignl1-206ENSMUST00000171080 2844 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Snord65-201ENSMUST00000104269 72 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm23946-201ENSMUST00000104423 197 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm12219-201ENSMUST00000119198 443 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm14528-201ENSMUST00000120615 231 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm11797-201ENSMUST00000121336 754 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm14053-201ENSMUST00000121662 470 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm12517-201ENSMUST00000122082 425 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hoxd8P23463 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm24002-201ENSMUST00000158456 104 ntBASIC8.62□□□□□ -1.03
Hoxd8P23463 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Hoxd8P23463 Gm17235-201ENSMUST00000169128 964 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms