Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm14727-201ENSMUST00000118526 525 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Gm14721-201ENSMUST00000121381 525 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Gm25780-201ENSMUST00000122528 253 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm25556-201ENSMUST00000158077 144 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Gm5272-201ENSMUST00000182730 982 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Ighv1-83-201ENSMUST00000199643 351 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 AL671874.1-201ENSMUST00000223746 1123 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col1a1P11087 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col1a1P11087 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Col1a1P11087 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 CT572985.1-201ENSMUST00000220599 4714 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Col1a1P11087 AC161247.1-201ENSMUST00000217744 2295 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm15696-201ENSMUST00000121730 445 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm22795-201ENSMUST00000157233 118 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Gm22728-201ENSMUST00000158087 129 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm28416-201ENSMUST00000188334 292 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.72□□□□□ -1.01
Col1a1P11087 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 AC131654.1-201ENSMUST00000219675 745 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 AC174082.2-201ENSMUST00000222094 543 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Gm2754-201ENSMUST00000223383 589 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 n-R5s217-201ENSMUST00000083341 116 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Pramel-201ENSMUST00000118979 1383 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm5361-201ENSMUST00000211041 1498 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Col1a1P11087 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col1a1P11087 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.72□□□□□ -1.01
Col1a1P11087 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col1a1P11087 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Col1a1P11087 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm38339-201ENSMUST00000195479 1829 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col1a1P11087 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col1a1P11087 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm8107-201ENSMUST00000117477 2009 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Gm26429-201ENSMUST00000104829 110 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm5752-201ENSMUST00000117771 594 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Gm14869-201ENSMUST00000119007 884 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm17212-201ENSMUST00000166666 259 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.71□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms