Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC7.28□□□□□ -1.24
Clrn1Q8K445 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Clrn1Q8K445 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clrn1Q8K445 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Clrn1Q8K445 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Clrn1Q8K445 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Clrn1Q8K445 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Clrn1Q8K445 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC7.27□□□□□ -1.24
Clrn1Q8K445 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
Clrn1Q8K445 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm15933-201ENSMUST00000117215 616 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm12599-201ENSMUST00000120534 792 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm1866-201ENSMUST00000120701 477 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm15079-201ENSMUST00000121943 216 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm22562-201ENSMUST00000157334 111 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Traj54-201ENSMUST00000165071 54 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm4246-201ENSMUST00000172822 216 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm20452-201ENSMUST00000174686 513 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm26269-201ENSMUST00000180144 126 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm7678-201ENSMUST00000181879 943 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Mir6919-201ENSMUST00000185146 62 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm38283-201ENSMUST00000193041 695 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC162467.2-201ENSMUST00000219397 2571 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Gm44509-201ENSMUST00000205400 1324 ntBASIC7.27□□□□□ -1.25
Clrn1Q8K445 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Clrn1Q8K445 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm12024-201ENSMUST00000118819 1253 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm11969-201ENSMUST00000118848 356 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm13224-201ENSMUST00000119586 94 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm8084-201ENSMUST00000120807 752 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm11838-201ENSMUST00000121999 231 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Gm23884-201ENSMUST00000122687 294 ntBASIC7.26□□□□□ -1.25
Clrn1Q8K445 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.26□□□□□ -1.25
Clrn1Q8K445 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms