Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm17979-201ENSMUST00000196646 611 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 CU074400.1-201ENSMUST00000224411 220 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 AC163295.2-202ENSMUST00000227763 1053 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm5997-201ENSMUST00000208154 1864 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 AC131743.4-201ENSMUST00000221638 1553 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm11796-201ENSMUST00000120208 972 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm15481-201ENSMUST00000120264 539 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm29813-201ENSMUST00000195856 447 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm36501-201ENSMUST00000221857 745 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gm6990-201ENSMUST00000086830 348 ntBASIC6.48□□□□□ -1.37
Rif1Q6PR54 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rif1Q6PR54 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm25919-201ENSMUST00000104271 132 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm13548-201ENSMUST00000144688 385 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm16112-201ENSMUST00000159075 382 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm27186-201ENSMUST00000184223 307 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm21181-201ENSMUST00000186249 330 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm37225-201ENSMUST00000193423 325 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm43553-201ENSMUST00000200900 685 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm40853-201ENSMUST00000221342 582 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm9255-201ENSMUST00000223225 581 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Olfr1333-201ENSMUST00000076019 954 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm25537-201ENSMUST00000103851 109 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Gm12901-201ENSMUST00000118690 532 ntBASIC6.47□□□□□ -1.37
Rif1Q6PR54 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Rif1Q6PR54 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rif1Q6PR54 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms