Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm9985-201ENSMUST00000044101 510 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Sox1P53783 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.26□□□□□ -1.09
Sox1P53783 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Sox1P53783 Cd99l2-203ENSMUST00000114586 3459 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Sox1P53783 Ppil4-201ENSMUST00000015901 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Sox1P53783 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sox1P53783 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Zic3-203ENSMUST00000088631 2980 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Hnrnpk-221ENSMUST00000177497 2585 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Rprd1b-201ENSMUST00000029180 4283 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.25□□□□□ -1.09
Sox1P53783 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm44848-201ENSMUST00000207808 3234 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Sox1P53783 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm11393-201ENSMUST00000118019 288 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Gm14554-201ENSMUST00000119548 661 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Gm12178-201ENSMUST00000120545 330 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Zbtb8os-204ENSMUST00000141235 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Gm19807-201ENSMUST00000173971 667 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Clec2j-202ENSMUST00000203658 606 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm45705-201ENSMUST00000211831 2134 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sox1P53783 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sox1P53783 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 AC099612.2-201ENSMUST00000226824 721 ntBASIC8.25□□□□□ -1.09
Sox1P53783 AC154692.1-201ENSMUST00000228314 544 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC8.25□□□□□ -1.09
Sox1P53783 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sox1P53783 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Gm43323-201ENSMUST00000202328 4258 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Gm1988-201ENSMUST00000188190 2565 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Gm28451-201ENSMUST00000189311 2560 ntBASIC8.25□□□□□ -1.09
Sox1P53783 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC8.25□□□□□ -1.09
Sox1P53783 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sox1P53783 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Gm10619-202ENSMUST00000186073 3287 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sox1P53783 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms