Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24462-201ENSMUST00000102430 106 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm23527-201ENSMUST00000104570 130 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm11622-201ENSMUST00000120525 691 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm4308-201ENSMUST00000179735 914 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm43590-201ENSMUST00000195987 387 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm7542-201ENSMUST00000201140 777 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm24696-201ENSMUST00000083878 134 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Nup88Q8CEC0 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm14824-201ENSMUST00000119421 737 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm12955-201ENSMUST00000119689 957 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm11809-201ENSMUST00000120923 950 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm27595-201ENSMUST00000184579 112 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm7560-201ENSMUST00000187748 873 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm43664-201ENSMUST00000196038 734 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm22711-202ENSMUST00000197029 135 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nup88Q8CEC0 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm24986-201ENSMUST00000104452 132 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm22152-201ENSMUST00000116966 125 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm14450-201ENSMUST00000119984 240 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm12692-201ENSMUST00000121092 546 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nup88Q8CEC0 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm24422-201ENSMUST00000157800 119 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.87□□□□□ -0.99
Nup88Q8CEC0 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms