Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.05□□□□□ -1.12
Shmt1P50431 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Shmt1P50431 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.05□□□□□ -1.12
Shmt1P50431 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Shmt1P50431 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.04□□□□□ -1.12
Shmt1P50431 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Shmt1P50431 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm12467-201ENSMUST00000117625 745 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Gm12402-201ENSMUST00000120536 334 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Gm15160-201ENSMUST00000120553 907 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm11962-201ENSMUST00000145746 255 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm7991-201ENSMUST00000168668 591 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Gm6536-201ENSMUST00000171180 615 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm27542-201ENSMUST00000184184 256 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm32899-201ENSMUST00000219694 207 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Shmt1P50431 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.04□□□□□ -1.12
Shmt1P50431 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Shmt1P50431 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Shmt1P50431 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Shmt1P50431 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm14480-201ENSMUST00000118521 433 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms