Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb2S4R1M3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb2S4R1M3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
H2afb2S4R1M3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb2S4R1M3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb2S4R1M3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb2S4R1M3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
H2afb2S4R1M3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb2S4R1M3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb2S4R1M3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Gm18671-201ENSMUST00000214826 683 ntBASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb2S4R1M3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb2S4R1M3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
H2afb2S4R1M3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb2S4R1M3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms