Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.64■□□□□ 0.25
H2afb3S4R1G7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H2afb3S4R1G7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb3S4R1G7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Gm45417-201ENSMUST00000209533 758 ntBASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Gm40848-201ENSMUST00000221998 324 ntBASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afb3S4R1G7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.61■□□□□ 0.25
H2afb3S4R1G7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afb3S4R1G7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Gm43017-201ENSMUST00000198296 752 ntBASIC16.59■□□□□ 0.25
H2afb3S4R1G7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms