Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ap4s1Q9WVL1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ap4s1Q9WVL1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.77■□□□□ 0.44
Ap4s1Q9WVL1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ap4s1Q9WVL1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ap4s1Q9WVL1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ap4s1Q9WVL1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.77■□□□□ 0.43
Ap4s1Q9WVL1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ap4s1Q9WVL1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Cap2-205ENSMUST00000225824 1634 ntBASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Ap4s1Q9WVL1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ap4s1Q9WVL1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ap4s1Q9WVL1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap4s1Q9WVL1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Gm7417-201ENSMUST00000192950 473 ntBASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap4s1Q9WVL1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ap4s1Q9WVL1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ap4s1Q9WVL1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms